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Posts

Deploying a Server for Bioinformatics Research

Recently, our lab acquired a server equipped with a standard Ubuntu operating system from Inspur, and I am tasked with configuring it to fulfill the specific requirements of our bioinformatics research. Given that my expertise in Linux is limited, I dedicated several days to this endeavor, and eventually completed the deployment process. The purpose of this guide is to assist researchers facing similar demands in comprehending the steps to configure their servers. Additionally, it aims to address potential issues that may arise during the configuration process, along with their respective solutions.

portfolio

publications

Short term prediction of wireless traffic based on tensor decomposition and recurrent neural network

Deng Tao, Wan Mengxuan, Shi Kaiwen, Zhu Ling, Wang Xichen, Jiang Xuchu. (2021). " Short term prediction of wireless traffic based on tensor decomposition and recurrent neural network. " SN Applied Sciences, 3(9), 1--14.

Energy consumption prediction using the GRU-MMattention-LightGBM model with features of Prophet decomposition

Liang Shaokun, Deng Tao, Huang Anna, Liu Ningxian, Jiang Xuchu. (2023). " Energy consumption prediction using the GRU-MMattention-LightGBM model with features of Prophet decomposition. " PloS one, 18(1), e0277085.

A cofunctional grouping-based approach for non-redundant feature gene selection in unannotated single-cell RNA-seq analysis

Deng Tao $^\dagger$, Chen Siyu, Zhang Ying, Xu Yuanbin, Feng Da, Wu Hao, Sun Xiaobo $^\dagger$. (2023). " A cofunctional grouping-based approach for non-redundant feature gene selection in unannotated single-cell RNA-seq analysis. " Briefings in Bioinformatics, 24(2), bbad042.

LEGEND: An integrative algorithm for identifying co-expressed and cofunctional genes in multimodal transcriptomic sequencing data

Deng Tao $^\dagger$, Xu Kaichen, Xu Yucheng, Hu Yuwei, Liu Zhihua, Chen Siyu, Wu Hao, Sun Xiaobo $^\dagger$. (2023). " LEGEND: An integrative algorithm for identifying co-expressed and cofunctional genes in multimodal transcriptomic sequencing data. " Under Review.

talks

teaching

Teaching experience 1

Undergraduate course, University 1, Department, 2014

This is a description of a teaching experience. You can use markdown like any other post.

Teaching experience 2

Workshop, University 1, Department, 2015

This is a description of a teaching experience. You can use markdown like any other post.